Wednesday 23 April 2014

周胡峰博士的科研很酷

[1] 周胡峰博士大作Progress in computational studies of host-pathogen interactions.,融合100多篇文献,提取精华,写成的博士论文的导论。这篇发表在JBCB的综述刚刚支持免费阅读(之前收费的)。欢迎大家阅读,转载,引用,http://www.worldscientific.com/doi/abs/10.1142/S0219720012300018

[2] People has been using STRING database wrongly for a long time. In this paper Dr. Zhou described the drawback of STRING database and B2H data set, and he also talks about how to use STRING database correctly and it has be applaud  by the community.

[3]周胡峰博士第一篇发表的一作论文,Comparative analysis and assessment of M. tuberculosis H37Rv protein-protein interaction datasets 发表在BMC genomics上,这篇工作曾经在InCob conference 做大会发言。这篇工作成功的解决了M. tuberculosis H37Rv protein-protein interaction datasets的质量问题,为以后的工作作出了重要铺垫。欢迎大家阅读,转载,引用,http://www.biomedcentral.com/1471-2164/12/S3/S20

[4]How to using STRING database correctly?
so many people has done it in a wrong why, in this paper, Dr. Zhou describe all the hidden limitations of STRING database and he proposed the correct way of using STRING database and his correct way of using STRING database has been widely accepted and cited.
Refer to his work,
*Zhou, Hufeng, and Limsoon Wong. “Comparative analysis and assessment of M. tuberculosis H37Rv protein-protein interaction datasets.” BMC genomics 12, no. Suppl 3 (2011): S20.
http://www.biomedcentral.com/1471-2164/12/S3/S20


[5]The unique advantage of IntPath
Pathway Enrichment Analysis has been so widely used, but few people realize the tools they use like DAVID, KEGG have many limitations. Especially the  "Incompleteness" limitation seriously affect the enrichment results. Here the IntPath database largely solves the incomplete problem by integrating and curating many available main stream Pathway data from different source. It is the most complete pathway database ever created. Try IntPath "Identify Pathways" function for pathway enrichment for your interested gene list, you will be amazed by the enrichment pathway results you see directly from the output.
http://compbio.ddns.comp.nus.edu.sg:8080/IntPath/

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